Network Neuroscience
● MIT Press
Preprints posted in the last 7 days, ranked by how well they match Network Neuroscience's content profile, based on 116 papers previously published here. The average preprint has a 0.05% match score for this journal, so anything above that is already an above-average fit.
Sadikov, A.; Cai, L. T.; Xiao, J.; Yuh, E. L.; Choi, H. L.; Sun, X.; Mac Donald, C. L.; Vassar, M. J.; Diaz-Arrastia, R.; Giacino, J. T.; Okonkwo, D. O.; Robertson, C. S.; Stein, M. B.; Temkin, N.; McCrea, M. A.; Jain, S.; Manley, G. T.; Mukherjee, P.; TRACK-TBI Investigators,
Show abstract
Generalizable neuroimaging biomarkers that detect cerebral cortical changes after traumatic brain injury (TBI) and predict patient outcomes are needed to improve care and to develop targeted therapies. We used morphometric inverse divergence (MIND) analysis of structural MRI to investigate cortical gray matter morphological networks cross-sectionally and longitudinally after TBI and correlate these with symptoms, disability and cognition six months after injury. Our findings support the Triple Network Model from functional MRI of post-traumatic alterations in the relationship between task-positive, default mode and salience networks. However, the strongest associations between early cortical similarity metrics and long-term patient outcomes involved the dorsal attention network and the limbic network as well as similarity metrics across Mesulam's hierarchy of laminar differentiation. Since MIND mapping of cortical gray matter networks only requires data that is a routine part of standard clinical MRI protocols and does not need image harmonization across different scanners, this work reports a promising new tool that is immediately available for advancing research and clinical care in TBI.
Syvalahti, T.; Tokariev, M.; Nevalainen, P.; Tuiskula, A.; Metsaranta, M.; Haataja, L.; Vanhatalo, S.; Tokariev, A.
Show abstract
Abstract Background Prediction of long-term neurodevelopmental outcomes remains challenging after perinatal asphyxia. Here, we studied whether computational metrics of brain function derived from neonatal EEG are associated with long-term neurodevelopment in infants with perinatal asphyxia. Methods Total of 36 term-born infants with perinatal asphyxia with or without hypoxic-ischemic encephalopathy were studied with neonatal multichannel electroencephalography (EEG). We computed local EEG amplitudes and phase-amplitude coupling (PAC), as well as large-scale functional cortical networks estimated using amplitude-amplitude correlations (AAC) and phase-phase correlations (PPC). These EEG-derived markers were tested for associations with neurodevelopmental outcomes at two years, assessed using the Griffiths Scales of Child Development, 3rd edition (GMDS-III). Results EEG amplitudes showed positive associations with GMDS-III Foundations of Learning and General Development scores across most electrodes during quiet sleep, with the strongest effects observed at frontal and central regions (r = 0.44-0.66). PAC showed negative associations with the same scores mainly over parietal and temporal regions (r = -0.45 to -0.55). Cortical AAC networks demonstrated the most robust and widespread negative associations in all frequency bands during quiet sleep (r = -0.47 to -0.54), with 70-72% of connections significant in high delta frequency. In turn, PPC networks showed frequency-selective and more spatially constrained negative associations during quiet sleep (r = -0.48 to -0.53), involving 5-12% of the network. Conclusions Both local and network-based metrics in the newborn brain show significant association with neurodevelopmental outcome at 2 years after perinatal asphyxia.
Liu, T.; Zeng, X.; Snitz, B. E.; Karikari, T. K.; Deek, R. A.
Show abstract
Blood biomarker models are increasingly used in Alzheimer's disease and related dementia translational research, but predictive performance can be inflated when the same dataset is used for both model development and evaluation. We assess the effect of data double dipping using simulations and NULISA proteomic data from the MYHAT-NI community-based cohort to predict brain amyloid-beta neuroimaging status. In both settings, training AUC increased as more biomarkers were added, while testing AUC peaked earlier and then declined. These findings show that data double dipping can inflate model performance and highlight the need for external validation or internal validation with data partitioning.
Poulakis, K.; Ioannou, K.; Bezgin, G.; Chiotis, K.; Iturria-Medina, Y.
Show abstract
Can we decode Alzheimers disease (AD) heterogeneity into a few portable axes that capture how amyloid-{beta}, tau and neurodegeneration (A-T-N) spatially co vary in vivo? To answer this question, we built a pipeline that harmonizes longitudinal amyloid-{beta}/tau PET and T1 MRI (gray matter) from ADNI cohort (12,430 images) with mixed effects modeling and then derived stage specific multimodal axes (mVCs) using linked component analysis, with robustness tested in simulations and external validation in the OASIS cohort (4,958 images). We identified a small set of multimodal axes that (i) recapitulate early tau weighted variation in cognitively unimpaired (CU) individuals, AD like A-T-N coupling in cognitively impaired (CI) individuals and atypical CU and CI participants with posterior (precuneus/occipitoparietal) and fronto insular/frontal weighted patterns, (ii) map onto domain specific cognition, APOE e4, and blood/CSF biomarkers of neurodegeneration, neuroaxonal injury and astrocyte activation, (iii) predict clinical transitions, (iv) generalize in an independent cohort, and (v) demonstrate modelling robustness to missing data, high dimensionality, and cross-cohort variability, enabling direct application of the extracted axes to new datasets for biomarker discovery and stratification. Multimodal axes provide a portable, interpretable layer for quantifying amyloid-{beta}-tau-neurodegeneration coupling at the individual level, complementing current biomarker-based staging frameworks based on A-T-N status and tau PET topography, and can be computed on new datasets to aid clinical assessment and trial enrichment.
Atik, A. F.
Show abstract
Objective: To determine whether absolute ictal energy on intracranial EEG identifies brain regions whose epileptogenic involvement is attenuated under existing baseline-normalized, dynamic-systems, and event-based frameworks. Approach: Intracranial EEG from 56 patients (five centers; 21 SEEG, 35 ECoG) was analyzed using the Teager-Kaiser Energy Operator computed as z-scored and raw envelopes; energy-dominant network regions (EDNRs) were defined as electrodes whose raw-energy rank exceeded their z-score rank by at least 2 positions. Hilbert decomposition characterized instantaneous amplitude and frequency. Main results: EDNRs were identified in 51 of 56 patients (91%; mean 3.4). Hilbert decomposition revealed elevated baseline amplitude in EDNRs relative to both non-involved regions (p < 0.001) and potential seizure onset zones (PSOZs, the top-ranked electrodes under both metrics; p = 0.029), with EDNRs participating in seizure-frequency dynamics comparable to PSOZs (mean ictal frequency shift +3.7 versus +4.1 Hz). EDNR detectability correlated directly with electrode count (Spearman r = 0.899, p < 0.001) without plateau. Significance: Absolute ictal energy identifies an epileptogenic network component with elevated baseline amplitude attenuated under baseline-normalized metrics. The dual-metric framework defines a complementary energy-based axis and establishes the second layer of a two-layer approach with seizure onset and propagation mapping as the first layer. EDNR detectability scales with electrode count, directly relevant to SEEG implantation strategy and to network-level inferences from heterogeneously covered cohorts.
Aguila, C. A.; Zhou, Z.; Lavelle, S. B.; Ojemann, W. K. S.; Kim, J.; Walsh, K.; Mournani, S. S.; Lucas, A.; Sinha, N.; Feys, O.; Scheid, B. H.; Davis, K. A.; Litt, B.; Conrad, E. C.
Show abstract
Objective: Interictal spikes have been proposed as a biomarker for both localizing seizure onset zones (SOZ) and tracking changes in seizure risk with neurostimulation in patients with drug-resistant epilepsy. Electrical stimulation can modulate spike rates acutely, and it has been proposed that measuring this modulation can help localize the SOZ. However, it is unclear whether stimulation-induced spike rate changes reflect epilepsy-specific pathology in the stimulated network or simply intrinsic regional excitability, which limits our understanding of their utility in epilepsy surgery planning. Methods: We analyzed low-frequency stimulation (LFS; 1 Hz) applied during a clinical seizure-induction protocol systematically targeting multiple brain regions in 43 patients with drug-resistant epilepsy undergoing intracranial EEG monitoring. A validated, automated spike detector was used to quantify pre-, during-, and post-stimulation spike rates. We tested whether the stimulation-evoked spike rate response (i) tracks the expected change in seizure risk from a seizure induction protocol, (ii) varies with anatomical stimulation site and epilepsy localization, (iii) localizes the SOZ beyond baseline spike rate, and (iv) is accompanied by changes in spike morphology. Results: Nearby LFS acutely increased spike rates in high-spiking channels (inter-stimulation median 2.25 vs. during-stimulation 4.25 spikes/min; p < 0.001), with effects attenuating with distance and resolving within approximately 30 seconds of stimulation offset. Mesial temporal lobe stimulation produced the largest increase in nearby spike rates relative to temporal neocortex and other cortex (Kruskal-Wallis p = 0.003), but this effect did not differ between patients with and without mesial temporal lobe epilepsy. A random forest classifier incorporating stimulation-evoked modulation features achieved an AUC of 0.787, comparable to a resting-state spike model (AUC 0.747; DeLong p = 0.81), indicating that stimulation-evoked spike changes do not add localizing information beyond resting-state spike rates. Stimulation produced a small but significant shift in spike morphology toward broader, higher-amplitude discharges (PERMANOVA p < 0.001), consistent with recruitment of a broader neuronal population. Significance: LFS-evoked increases in interictal spike rates reflect intrinsic regional excitability, greatest in the mesial temporal lobe, rather than epilepsy-specific pathology, and do not improve SOZ localization over resting-state spike rates. These results argue against using the change in spikes with stimulation to localize the SOZ. On the other hand, the transient spike rate increase induced by a pro-epileptic protocol supports the acute change in spike rate as a biomarker of the effect of stimulation on seizure risk, with potential to guide parameter selection for epilepsy neuromodulation.
Kocsis, Z.; Calmus, R. M.; Kasa, J.; Berger, J. I.; Rhone, A.; Brown, G.; Diefelt-Streese, C.; Bowren, M.; Taylor, P. N.; Sarrett, M. E.; Choi, I.; McMurray, B.; Kawasaki, H.; Griffiths, T. D.; Howard, M. A.; Petkov, C. I.
Show abstract
There is substantial interest in understanding neurological impact and recovery over time, but there is a dearth of longitudinal assessment extending from minutes to months surrounding neural system impact. We compared rare intraoperative recordings in three patients, obtained immediately before and after anterior temporal lobe (ATL) resection during a semantic prediction task, with longitudinal source-localized electroencephalography (EEG) obtained 2-6 weeks before and 2 and 6-14 months after surgery. Relative to controls (n = 20), task performance showed sustained impairment in the two left-hemisphere patients and delayed impact in the right-hemisphere patient. Consistent with theory on ipsilateral and contralateral hemisphere compensation, all three patients exhibited bilateral EEG alterations in speech responses and effective connectivity that did not recover to pre-operative levels. Direct comparison of the datasets for intrinsic neurophysiological biomarkers associated with timescales of processing ({tau}INT) and excitatory-inhibitory balance (aperiodic slope, {chi}SPEC) showed a striking months-long reduction in rapid timescale processing and gradually increasing aperiodic slope (e.g., putatively increased cortical inhibition) in the ipsilateral hemisphere of all three patients. Amidst these neurophysiological alterations, task performance did not return to pre-operative levels. These rare longitudinal patient data advance a framework to broadly evaluate neurological impact over multiple timeframes.
Noroozi, R.; Higgins Tejera, C.; Chen, M.; Briggs, F. B. S.; Bhargava, P.; Fitzgerald, K. C.
Show abstract
The course of multiple sclerosis (MS) is highly heterogeneous, yet the biological mechanisms underlying this variability remain incompletely understood. Although metabolic alterations have increasingly been associated with disease progression, existing observational evidence is limited by confounding, reverse causation, and an inability to establish causal mechanisms. To bridge this gap, we used a metabolome-wide Mendelian Randomization (MR) framework, including thorough sensitivity analyses, to identify metabolites genetically linked to MS severity that can causally affect it. Bidirectional MR analyses revealed a subset of amino acid and lipid pathways with strong, consistent effects across different MR approaches, confirmed by tests for heterogeneity, horizontal pleiotropy, and LD confounding. For metabolites prioritized by metabolome-wide MR with evidence of causal effects, we conducted genetic colocalization at loci encompassing proximal enzyme-encoding genes, leveraging the corresponding instrumental variants to assess shared underlying genetic signals. This process revealed shared genetic signals between metabolite levels and MS severity, mapped to the FADS1/2 and CYP4F2 loci. A subsequent pathway-resolved set of cis-MR analyses across FADS1/2-derived polyunsaturated fatty acid (PUFA) metabolites, using a functional variant that proxies reduced {triangleup}5-desaturase activity, showed consistent effects indicating that FADS1 perturbation is associated with MS severity. Collectively, these results highlight FADS1 as a key driver of PUFA-related causal effects on MS severity in both systemic (circulating metabolites) and brain cell-specific contexts. Additional supportive cis-MR evidence implicates the disruption of CYP4F2 as another PUFA-metabolizing enzyme.
Shah, M.
Show abstract
Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disease affecting more than 450,000 individuals worldwide and is frequently diagnosed more than 12 months after symptom onset, delaying intervention during a critical early window. Because up to 80% of patients develop dysarthria within two years, subtle changes in speech provide a signal of early bulbar motor neuron degeneration. However, existing speech-based systems rely on supervised classification trained on limited datasets, achieving moderate sensitivity and depending heavily on labeled disease examples, which restrict scalability and early detection. This study introduces SPEAK-NORM, the first-ever normative speech modeling framework for early ALS diagnosis, which learns age- and sex-conditioned motor-speech distributions exclusively from healthy individuals. A conditional variational autoencoder models coordination of hypoglossal, laryngeal, and respiratory motor pathways, and deviation from this healthy manifold is quantified through latent representations and reconstruction error to form a 354-dimensional profile. A calibrated linear Support Vector Machine performs subject-level classification under subject-disjoint validation. On the VOC-ALS database (n = 153), SPEAK-NORM achieves 98% accuracy with balanced sensitivity and specificity, significantly outperforming established clinical acoustic indices and prior systems. The framework maintains strong performance under cross-task generalization and when retrained on healthy controls in independent dementia and Parkinson disease cohorts, demonstrating disease-specific deviation patterns rather than generic neurodegenerative change. Spectral, temporal, and latent separations further support interpretability. By modeling healthy speech instead of memorizing disease examples, SPEAK-NORM enables scalable early neuromotor screening using recording devices, with potential to support earlier diagnosis, differential classification, and monitoring of ALS progression.
Monti, M. M.; Hopkins, A. R.; Spivak, N. M.; Cain, J. A.; Gumarang, J.; Patterson, D.; Rosario, E. R.; Schnakers, C.
Show abstract
Background: Thalamic low-intensity transcranial focused ultrasound (tFUS) has shown promise for increasing behavioral responsiveness in disorders of consciousness (DOC), but no study has examined whether it can causally modulate the well-validated behavioral, electrophysiological, and metabolic biomarkers of DOC impairment. Methods: Sixteen adult patients (44% Female; Age, M=37.81, SD=15.97) with a chronic DOC (Time Since Injury, M=3.39, SD=1.94 years) secondary to severe brain injury (TBI 44%, non-TBI 56%) underwent a 10-day inpatient, longitudinal, single-arm, open-label protocol. tFUS was delivered in a single session targeting the left central thalamus. Well-known behavioral (CRS-R), electrophysiological (EEG {delta}/{beta} ratio), metabolic (18F-FDG PET), and polysomnographic outcomes were assessed at baseline and after sonication. Results: The maximum CRS-R total score increased significantly following tFUS compared to baseline (M=13.27 vs. M=10.33; t(14)=7.407, p<0.001, d=1.913), as did the global EEG {delta}/{beta} ratio (N=14; W=17, p=0.025, r=0.68), with the degree of frontal slowing positively predicting behavioral gains ({tau}b=0.51, p=0.016). Glucose metabolism decreased bilaterally in thalamus and frontal, temporal, and parietal cortices at both post-tFUS timepoints compared to baseline. Finally, N2 sleep increased by 33% following tFUS (N=11; t(10)=2.386, p=0.038, d=0.72), though this did not survive correction. No severe adverse events were observed. Conclusion: Thalamic tFUS can causally modulate well-validated behavioral, electrophysiological, and metabolic biomarkers of DOC. The convergent inhibitory signature across these measures suggests a thalamocortical reset mechanism, complementing existing excitatory neuromodulation approaches and providing the mechanistic foundation for a large, randomized sham-controlled trial.
Nakano, T.; Onozuka, D.; Ikeda, Y.; Washiyama, K.; Takashima, Y.
Show abstract
Background. On 8 May 2023 the Japanese Ministry of Health, Labour and Welfare reclassified COVID-19 under the Infectious Disease Control Law from a designated infectious disease (with case-by-case reporting requirements comparable to those of a Category-2 disease) to a Category-5 ("Class-5") notifiable disease, joining the same category as seasonal influenza and most other endemic respiratory infections. Under this regime, COVID-19 case counts are reported weekly from a nationwide network of sentinel medical facilities (initially approximately 5,000, reduced to approximately 3,000 following an April 2025 surveillance reform), and individual case reporting is no longer required. We aimed to characterize the spatial topology of COVID-19 epidemics under this sentinel-surveillance regime and to detect, in a data-driven manner, any structural change in epidemic dynamics over this period. Methods. We analyzed weekly per-sentinel-facility COVID-19 case counts in all 47 prefectures of Japan from 2023-W17 to 2026-W19 (159 weeks). For each week we computed the Shannon pseudo-entropy S of the prefecture-share distribution and global, local, and time-lagged Moran's I across a 92-edge contiguity-based adjacency matrix. To identify any structural change in a data-driven manner, we adopted a two-stage approach motivated by an empirical regularity established in Section 3: we first verified the wave-amplitude-invariant entropy ceiling (S_max >= 3.80 in all five pre-transition waves), then restricted change-point detection to the weeks after S(t) last attained this ceiling, applying PELT, CUSUM, and Bai-Perron sup-F within this restricted region. Seasonal structure was characterized by truncated Fourier regression with first-order autoregressive errors (Cochrane-Orcutt) over harmonic orders K = 1 to 6; between-period comparisons used moving block bootstrap as the principal inferential statistic. Results. The five epidemic waves during 2023-2025 followed a stereotyped spatial template in which S(t) traced a characteristic U-shape around each peak, with a wave-amplitude-invariant entropy ceiling reaching on average 99.4% of the theoretical maximum ln 47 (range 3.820-3.836, SD 0.006). The last week in which S(t) attained this entropy ceiling was 2025-W42. Restricting change-point detection to the 29 subsequent weeks, PELT and CUSUM localised the structural break to late 2025: PELT identified 2025-W48 (robust across penalty values >= sigma^2*ln(n) and across entropy-ceiling thresholds 3.78-3.82) and CUSUM peaked at 2025-W50 (p < 0.0001), placing the break within a two-week window centred on late November 2025. Bai-Perron sup-F peaked later at 2026-W02 (p = 0.062, with reduced power on n = 29). We adopted 2025-W48 as the principal change-point, defining 135 pre-transition weeks and 24 post-transition weeks. Two anti-phase spatial modes were identified in the pre-transition record: a summer-onset Okinawa-seeded Kyushu cascade (Mode A; annual peak epi week 26) and a winter-onset Tohoku-centred connected-cluster mode (Mode B; annual peak epi week 51), approximately 25 epi weeks out of phase. After the regime transition, this ceiling was not attained, and the spatial-persistence ratio I(tau = 8 wk)/I(0) shifted from a highly variable distribution centred near 0.27 (pre-transition, 125 weeks) to a tightly clustered distribution around 0.89 (post-transition, 24 weeks); the mean difference was 0.62 (95% bootstrap CI 0.32 to 0.90; moving block bootstrap p < 0.0001 across block lengths 1-12). The principal finding remained significant under autoregressive-augmented null models and was robust to adjacency-matrix choice, the April 2025 surveillance reform, harmonic order K = 1 to 6, and Okinawa exclusion. Conclusions. Data-driven analysis of 159 weeks of Japanese sentinel surveillance identifies a candidate spatial-persistence regime transition emerging in late November 2025, in which the spatial structure of weekly case shares persists for at least 8 weeks rather than dissipating as in pre-transition. The transition coincides with loss of the wave-amplitude-invariant entropy ceiling and with absence of the Mode A signature through the observed post-transition period. The recent uptick in Okinawa case shares (continuing through 2026-W19) leaves open whether the Mode A signature is structurally suppressed or merely deferred; observation through summer 2026 is required to distinguish a sustained shift from a transient anomaly.
Fayette, L.; Brendel, K.; Mentre, F.
Show abstract
Joint modelling of longitudinal data using non-linear mixed effects models and time-to-event outcomes provides a suitable framework to account for informative censoring when estimating biomarker dynamics and quantifying event risk using covariates and longitudinal trajectories. Their usefulness in clinical research depends on data collection design, particularly to precisely estimate the association (link) parameter between longitudinal and survival processes. However, optimal design strategies have so far been addressed separately for longitudinal and survival endpoints and remain unexplored for joint models. We propose two Fisher Information Matrix (FIM) computation methods for joint models, relying on Monte-Carlo integration over observations combined with either Markov Chains Monte-Carlo or Adaptive Gaussian Quadrature to integrate random effects. Their accuracy is assessed against clinical trial simulations in an oncological example based on the HORIZON III study with a tumour-growth-survival model including discrete and continuous covariates. We apply these methods to quantify the impact of follow-up duration, sampling richness, sample size, and covariate distribution on parameter uncertainty and test power. In our example, longitudinal-parameter uncertainty is barely affected by follow-up duration or sampling richness, whereas survival-parameter uncertainty decreases substantially from 1-year to 2-year follow-up. The number of subjects needed (NSN) to achieve <15\% uncertainty on the link parameter is comparable for a 2-year rich design and a 3-year sparse design. Optimal covariate distributions are stable across designs and systematically improve test power, outperforming longer and richer but non-optimised designs. These FIM-based methods accurately predict uncertainty and test powers, enabling design evaluation and NSN computation for joint-model-based clinical studies.
Abbott, M.; Angione, K.; Benke, T. A.; Chao, H.-T.; Coyne, J.; Cunningham, K.; deCampo, D.; Downs, J.; Goss, J.; Grinspan, Z.; Jolliffe, M.; Knowles, J.; Marsh, E.; McKee, J. L.; Miele, A.; Pierce, S. R.; Ruggiero, S. M.; Rigby, C. S.; Stringfellow, M.; Tefft, S.; Xiong, K.; Helbig, I.; Demarest, S.
Show abstract
AIM: STXBP1-related disorder (STXBP1-RD) is a severe developmental and epileptic encephalopathy characterized by early-onset seizures and persistent cognitive and motor impairments. With disease-modifying trials emerging, a disorder-specific severity scale is needed. To address this, we adapted a validated clinician-reported measure from CDKL5 Deficiency Disorder to develop the STXBP1 Clinical Severity Assessment (S-CSA) and evaluated its psychometric properties. METHOD: The S-CSA was adapted from the CDKL5 Clinical Severity Assessment through expert consensus sessions with STXBP1 clinicians. Revisions addressed gaps in motor and vision domains, adding tremor and vision items. The measure was administered to 123 individuals with STXBP1-RD. Psychometric evaluation included confirmatory factor analysis, internal consistency, composite reliability, average variance extracted, and distinctiveness, compared with recommended thresholds. RESULTS: Analyses supported a three-domain structure (motor, communication, vision) with factor loadings >0.5 and strong internal consistency (Cronbachs alpha >0.7; composite reliability >0.88). Model fit and variance metrics met recommended standards, and domains demonstrated distinctiveness. No ceiling or floor effects were observed. Minimal skew was seen in motor (0.34) and communication (0.16) domains; positive skew in vision (2.2) was seen, identifying patients with and without cortical visual impairment. INTERPRETATION: The S-CSA demonstrates strong validity and reliability in STXBP1-RD and may show utility in clinical trials for STXBP1-RD and potentially other severe DEEs. Key Words: STXBP1-Related Disorder, Developmental and Epileptic Encephalopathies, Clinical Outcome Assessments
Li, Z. A.; Neyman, O.; Rutlin, J.; Lugar, H. M.; Koller, J. M.; Shimony, J. S.; Hershey, T.
Show abstract
Wolfram syndrome (WFS) is characterized by youth-onset insulin-dependent diabetes and neurological deficits. Brain white matter deficiency has been reported, but its trajectory remains unclear. Applying diffusion basis spectrum imaging models longitudinally in 29 individuals with WFS (baseline ages, 5.2 to 25.8 years; maximum 7 visits) and 52 matched controls, we found that WFS is associated with microstructural alterations suggesting diminished axonal integrity, myelin content, and cellularity. These changes were present and stable early in the disease progression in visual and auditory-related regions, whereas abnormalities in the corpus callosum appeared later in adolescence and adulthood. Our results support developmental hypomyelination as a neurophenotype of WFS.
So, I.; Rios-Carrillo, R.; Coleman, K. K. L.; Finger, E. C.; Baron, C. A.
Show abstract
ABSTRACT INTRODUCTION: Microscopic fractional anisotropy ({micro}FA), an emerging diffusion MRI metric, may be more sensitive than conventional metrics to gray matter microstructural changes in neurodegeneration. This pilot study compared {micro}FA, mean diffusivity (MD), and volume between genetic frontotemporal dementia (FTD) variant carriers and non-carriers in the insula, frontal pole, and medial orbitofrontal cortex (mOFC). METHODS: Carriers and familial non-carriers of FTD variants in C9orf72, GRN, or MAPT were scanned between October 2024-December 2025. Non-parametric aligned rank transform ANCOVAs were computed to analyze between-group differences in {micro}FA, MD, and volume while controlling for age. RESULTS: Carriers (n=12) exhibited lower insula {micro}FA than non-carriers (n=8): F(1,19)=5.89, 95% CI [-10.7,-0.75], p=0.027, 2p=0.26. No group-differences were observed in other metrics, including MD and volume. DISCUSSION: Reduced {micro}FA in the insula, a region vulnerable to early atrophy in FTD, may be more sensitive to early microstructural changes in genetic FTD than traditional diffusivity measures.
Chen, M.; Noroozi, R.; Smith, M. D.; Sanjayan, M.; Tejera, C. H.; Bhargava, P.; Dewey, B. E.; Mowry, E. M.; Fitzgerald, K. C.
Show abstract
Background: Progressive multiple sclerosis (MS) is characterized by ongoing neurodegeneration and limited therapeutic options. Circulating metabolites provide insight into disease biology, yet biomarkers that predict disability progression and reflect treatment response are lacking. We aimed to identify metabolomic signatures associated with longitudinal MRI measures of brain atrophy and to evaluate whether ibudilast treatment was associated with metabolite trajectories over time. Methods: We repeatedly profiled 1,726 plasma metabolites using untargeted UPLC-MS/MS in 244 participants from the 96-week SPRINT-MS randomized trial of oral ibudilast, up to 100 mg daily, versus placebo. Weighted gene co-expression network analysis was used to derive groups of related metabolites. Associations between baseline metabolite groups and longitudinal MRI outcomes were evaluated using linear mixed-effects models adjusted for demographic, clinical, and treatment covariates. The primary outcome was the rate of whole-brain atrophy measured by brain parenchymal fraction (BPF), defined as the proportion of intracranial volume occupied by brain tissue. Secondary outcomes included white matter fraction (WMF), gray matter fraction (GMF), and cortical thickness (CTH). Metabolite groups nominally associated with MRI outcomes, defined as p < 0.05, were followed by individual metabolite analyses to identify potential drivers. Significant metabolites were tested for replication in a comparable real-world observational HEAL-MS cohort with longitudinal MRI data. Lastly, we tested whether ibudilast treatment was associated with metabolite trajectories and performed metabolite set enrichment analysis. Findings: Higher baseline levels of glycerophospholipids were associated with slower decline in both BPF and WMF, and sphingomyelins were similarly associated with slower BPF decline. For example, higher 1-palmityl-2-stearoyl-GPC (O-16:0/18:0) levels were associated with slower BPF decline in SPRINT-MS (beta = 0.016 [95% CI: 0.008, 0.024]; p = 4.35 x 10^-5) and replicated in HEAL-MS (beta = 0.108 [95% CI: 0.006, 0.211]; p = 3.90 x 10^-2). Metabolites associated with GMF preservation were enriched in androgenic steroids and steroid sulfates, with consistent positive associations observed in the replication cohort, whereas metabolites inversely associated with CTH were predominantly xenobiotic-related. Ibudilast treatment was associated with increased sphingomyelin species, such as palmitoyl sphingomyelin (d18:1/16:0; beta = 0.185 [95% CI: 0.085, 0.286]; FDR = 1.79 x 10^-2), and decreased levels of amino acid-related metabolites, such as anthranilate (beta = -0.270 [95% CI: -0.403, -0.137]; FDR = 3.87 x 10^-2). Pathway-based analyses corroborated these findings, highlighting glycerophospholipid and sphingolipid metabolism as key pathways implicated in brain atrophy in MS. Interpretation: Distinct lipid subsets were associated with slower brain atrophy in people with MS, and ibudilast treatment was associated with metabolite alterations in potentially neuroprotective directions. Metabolomics may provide prognostic and pharmacodynamic biomarkers for progressive MS.
Maharshi, A.; Ladha, B.; Malani, R.; Palaskar, P.
Show abstract
Background: Accurate evaluation of fine motor abilities is a key aspect of neurological rehabilitation. However, conventional approaches like goniometry are limited by variations among raters and their difficulty in detecting active movement. On the other hand, computer vision-based software delivers non-invasive and quantitative analysis of hand movements. An innovative computer-vision-based software tool, F.A.I.R. Chance(C), was developed to track and analyze individual finger joint movements on a camera-equipped laptop and give real-time numerical feedback. However, its metrics require validation in a healthy population before the tool can be used for clinical purposes. Objective: To assess the reliability and validity of finger movement assessment by the F.A.I.R. Chance computer vision-based tool in healthy adult participants. Methods: An observational cross-sectional study was done at MGM School of Physiotherapy, comprising 30 healthy participants between 18 and 60 years of age. Finger movements like flexion, extension, abduction, and adduction were measured with a standard handheld goniometer. These same finger movements were then measured with the tool at two time points separated by a 30-minute interval to determine the test-retest reliability. The tool's measurements were compared with the goniometric measurements to determine its concurrent validity. Test retest reliability was checked by the Intra-class Correlation Coefficient ICC (2,1), while concurrent validity was tested through Pearson's correlation coefficients. Results: Metacarpophalangeal and proximal interphalangeal joint motions demonstrated moderate to good test-retest reliability (ICC: 0.716-0.953) for the F.A.I.R. Chance tool. However, distal interphalangeal joint movements had lower consistency. Good reliability (ICC: 0.754-0.908) was seen for movements of abduction and adduction in the fingers. Strong concurrent validity for extension movements of the metacarpophalangeal joints (r=0.760-0.914) and moderate concurrent validity for flexion movements of the metacarpophalangeal joints (r=0.427-0.604) was demonstrated for all fingers for the F.A.I.R. Chance tool. Concurrent validity for adduction and abduction movements demonstrated a low to fair correlation with goniometric measurements (r=0.210-0.440). This is consistent with previous research showing poor agreement between goniometry and adduction-abduction movements of the fingers. Conclusion: The F.A.I.R. Chance tool shows good reliability and acceptable concurrent validity to assess fine motor movements in the healthy adult population. This sets a basis for further clinical study of the tool in the target population with fine motor impairments. Keywords: artificial intelligence; assistive technology; computer vision; fine motor evaluation; hand function;
Burke, K. M.; Calcagno, N.; Mandepudi, S.; Premasiri, A.; Hall, K. C.; Vieira, F. G.; Berry, J. D.; Straczkiewicz, M.
Show abstract
Wearable digital health technologies may complement traditional gait assessments in amyotrophic lateral sclerosis (ALS) by sensitively capturing real-world mobility changes. In this study, we validated six digital gait metrics derived from ankle-worn sensors in a natural history cohort of 182 individuals with ALS. Investigated metrics correspond to various aspects of gait, including volume, speed, intensity, similarity, variability, and fragmentation. Longitudinal analyses showed significant declines in step count, peak cadence, stride intensity, and stride similarity, with increasing stride duration variability and walking fragmentation over 52 weeks. Many participants exhibited greater relative change in the gait metrics than the self-reported ALS Functional Rating Scale-Revised (ALSFRS-RSE). Stratified analyses revealed that digital metrics captured significant functional decline even in participants with stable walking scores on the ALSFRS-RSE. These findings support the potential utility of these metrics for disease monitoring in ALS clinical care and trials.
Hu, C.; Zhu, W.; Watterson, A.; Morini, S.; Morris, M.; Visweswaran, S.; Chang, J.; Cai, T.; Chitnis, T.; Xia, Z.
Show abstract
Background: Comorbidities are common in multiple sclerosis (MS) and may influence disability outcomes, but their dynamic impact on bidirectional disability transitions and long-term disability remains incompletely understood. Better understanding of this longitudinal relationship could inform personalized disability management strategies for people with MS. Methods: We leveraged two large electronic health record (EHR)-linked MS registries and applied multi-state Markov models (MSMs) to examine the extent to which individual comorbidities and overall comorbidity burden were associated with short-term disability transitions, long-term disability transition probabilities, and expected time spent in each disability state. We additionally compared MSM-based predictions of confirmed disability worsening (CDW) with Cox proportional hazards (CoxPH) model-based predictions using the integrated Brier score with bootstrap validation. Results: Among 3,723 patients with MS (74.6% female; 86.2% non-Hispanic White; mean age=41.9 years; mean disease duration=5.4 years) contributing 41,860 disability assessments over a mean follow-up of 7.3 years, higher cardiometabolic and psychiatric comorbidity burden was associated with increased transition intensity toward worse disability states and decreased transition intensity toward improvement, with a stepwise gradient across burden levels. Compared with patients without comorbidities, those with [≥]4 comorbidities had a 28% higher risk of worsening (HR=1.28 [1.06, 1.55]) and a 20% lower risk of improvement (HR=0.80 [0.67, 0.95]). Each individual comorbidity was significantly associated with worse disability transitions. Long-term estimates indicated a higher 5-year probability of severe disability and fewer years spent in the no-disability state among patients with greater comorbidity burden. CoxPH models showed directionally consistent associations but lower predictive accuracy for CDW compared with MSMs. Conclusion: Cardiometabolic and psychiatric comorbidities are associated with worse disability trajectories in MS, reducing improvement and accelerating progression. By providing a nuanced framework to quantify short-term disability transitions and long-term disability patterns, MSMs may have real-world clinical utility in disability prediction.
Trasciatti, C.; Pilotto, A.; Tolassi, C.; Ragni, F.; Marcello, E.; Moroni, M.; Bovo, S.; Martinuzzo, C.; Pelucchi, S.; Caratozzolo, S.; Girotto, I.; D'Andrea, L.; Stringhi, R.; L. Benedet, A.; Pola, I.; Zetterberg, H.; Ashton, N.; Jurman, G.; di Luca, M.; Padovani, A.
Show abstract
Alzheimer's disease (AD) is characterized by complex alterations in synaptic, glial, neuronal and inflammatory markers. Given its emerging role at the interface of synaptic dysfunction and inflammation, the astrocytic marker GFAP may represent a cross-domain hub linking synaptic, neuronal and inflammatory alterations. Using multivariate and network-based analyses we examined the relationships among cerebrospinal fluid (CSF) biomarkers of astrocytic activation and synaptic failure, inflammation, and neurodegeneration in biologically confirmed AD patients and healthy controls (HC). We studied 60 AD patients and 40 HC. CSF concentrations of Neurogranin, SNAP-25, CAP2, NfL, GFAP, IL-1 , IL-1{beta}, IL-8, MCP-1, TNF were measured. Associations were assessed using Spearman correlations, LASSO regression, and network analysis to characterize multivariate dependency structures. Compared with controls, AD patients showed significantly higher CSF levels of Neurogranin, SNAP-25, CAP2, NfL, GFAP, IL-1{beta}, TNF- .. In AD, synaptic biomarkers were strongly intercorrelated and associated with astroglial activation, inflammatory markers, and tau-related pathology. Network analysis identified GFAP as a cross-domain hub linking synaptic, inflammatory, and neurodegenerative domains in AD. In controls, GFAP was mainly associated with neuronal injury markers. Network-based modelling revealed a disease-related reorganization of biomarker connectivity in AD, with GFAP occupying a central cross-domain position, supporting a systems-level view of AD pathophysiology.